Most recent publications from the project
Desforges, J.P., Legrand, E., Boulager, E., Liu, P., Xia, J., Butler, H., Chandramouli, B., Ewald, J., Basu, N., Hecker, M., Head, J., Crump, D.. 2021. Using Transcriptomics and Metabolomics to Understand Species Differences in Sensitivity to Chlorpyrifos in Japanese Quail and Double-Crested Cormorant Embryos. Environ Toxicol Chem 2021;00:1–15. Details
Mondou, M., Maguire, S., Pain, G., Crump, D., Hecker, M., Basu, N., Hickey, G.. 2021. Envisioning an international validation process for New Approach Methodologies in chemical hazard and risk assessment. Environmental Advances, Vol 4, July. 2021. Details
Alcaraz, A.J.G, Mikulášek, K., Potěšil, D., Park, B., Shekh, K., Ewald, J., Burbridge, C., Zdráhal, Z., Schneider, D., Xia, J., Crump, D., Basu, N., and Hecker, M.. 2020. Assessing the Toxicity of 17α-Ethinylestradiol in Rainbow Trout Using a 4-Day Transcriptomics Benchmark Dose (BMD) Embryo Assay Environ. Sci. Technol. 2021, 55, 15, 10608–10618. Details
Alcaraz, A.J.G, Potěšil, D., Mikulášek, K., Green, D., Park, B., Burbridge, C., Bluhm, K., Soufan, O., Lane, T., Pipal, M., Brinkmann, M., Xia, J., Zdráhal, Z., Schneider, D., Crump, D., Basu, N., Hogan, N., and Hecker, M.. 2020. Development of a Comprehensive Toxicity Pathway Model for 17α-Ethinylestradiol in Early Life Stage Fathead Minnows (Pimephales promelas). Environmental Science & Technology. 55 (8), 5024-5036. Details
Crump, D., Boulanger, E., Farhat, A., Williams, K.L., Basu, N., Hecker, M., Head, J.A. 2020. Effects on Apical Outcomes of Regulatory Relevance of Early-Life Stage Exposure of Double-Crested Cormorant Embryos to 4 Environmental Chemicals. Environmental Toxicology. Details
Pain, G., Hickey, G. Mondou, M., Crump, D., Hecker, M., Basu, N., Maguire, S. 2020. Drivers of and Obstacles to the Adoption of Toxicogenomics for Chemical Risk Assessment: Insights from Social Science Perspectives. Environmental Health Perspectives, https://doi.org/10.1289/EHP6500. Details
Ewald, J.D., Soufan, O., Xia, J., Basu, N. 2020. FastBMD: an online tool for rapid benchmark dose-response analysis of transcriptomics data. Bioinformatics, btaa700, https://doi.org/10.1093/bioinformatics/btaa700. Details
Ewald, J.D., Soufan, O., Crump, D., Hecker, M., Xia, J., Basu, N. 2020. EcoToxModules: Custom Gene Sets to Organize and Analyse Toxicogenomics Data from Ecological Species. Environmental Sciences & Technology
https://doi.org/10.1021/acs.est.9b06607. Details
https://doi.org/10.1021/acs.est.9b06607. Details
Mondou, M., Hickey G., Rahman, T., Maguire, S., Pain, G., Crump, D., Hecker, M., Basu, N. 2020. Factors affecting the perception of New Approach Methodologies (NAMs) in the ecotoxicology community. Integr Environ Assess Manag. https://doi.org/10.1002/ieam.4244. Details
Soufan, O., Ewald. J., Viau, C., Crump, D., Hecker, M., Basu, N., Xia, J. 2019. T1000: A reduced gene set prioritized for toxicogenomic studies. PeerJ 7:e7975 https://doi.org/10.7717/peerj.7975. Details
Farhat, A., Crump, D., Bidinosti, L., Boulanger, E., Basu, N., Hecker, M., Head, J.A. 2019. An Early‐life Stage Alternative Testing Strategy for Assessing the Impacts of Environmental Chemicals in Birds. Environ Toxicol Chem. doi: 10.1002/etc.4582. Details
Basu N, Crump D, Head J, Hickey G, Hogan N, Maguire S, Xia J, Hecker M. 2019. EcoToxChip: A next-generation toxicogenomics tool for chemical prioritization and environmental management. Environ Toxicol Chem. 38(2):279-288. Details