Most recent publications from the project
Ewald, J.D., Soufan, O., Xia, J., Basu, N. 2020. FastBMD: an online tool for rapid benchmark dose-response analysis of transcriptomics data. Bioinformatics, btaa700, https://doi.org/10.1093/bioinformatics/btaa700. Details
Ewald, J.D., Soufan, O., Crump, D., Hecker, M., Xia, J., Basu, N. 2020. EcoToxModules: Custom Gene Sets to Organize and Analyse Toxicogenomics Data from Ecological Species. Environmental Sciences & Technology
https://doi.org/10.1021/acs.est.9b06607. Details
https://doi.org/10.1021/acs.est.9b06607. Details
Mondou, M., Hickey G., Rahman, T., Maguire, S., Pain, G., Crump, D., Hecker, M., Basu, N. 2020. Factors affecting the perception of New Approach Methodologies (NAMs) in the ecotoxicology community. Integr Environ Assess Manag. https://doi.org/10.1002/ieam.4244. Details
Soufan, O., Ewald. J., Viau, C., Crump, D., Hecker, M., Basu, N., Xia, J. 2019. T1000: A reduced gene set prioritized for toxicogenomic studies. PeerJ 7:e7975 https://doi.org/10.7717/peerj.7975. Details
Farhat, A., Crump, D., Bidinosti, L., Boulanger, E., Basu, N., Hecker, M., Head, J.A. 2019. An Early‐life Stage Alternative Testing Strategy for Assessing the Impacts of Environmental Chemicals in Birds. Environ Toxicol Chem. doi: 10.1002/etc.4582. Details
Basu N, Crump D, Head J, Hickey G, Hogan N, Maguire S, Xia J, Hecker M. 2019. EcoToxChip: A next-generation toxicogenomics tool for chemical prioritization and environmental management. Environ Toxicol Chem. 38(2):279-288. Details