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Publications

Most recent publications related to the EcoToxChip

Legrand E, Basu N, Hecker M, Crump D, Xia J, Chandramouli B, Butler H, Head JA. Targeted Metabolomics to Assess Exposure to Environmental Chemicals of Concern in Japanese Quail at Two Life Stages. Metabolites. 2021; 11(12):850. Details

van der Vegt, R.G.,  Maguire, S., Crump, D., Hecker, M., Basu, N. & Hickey, G.M., 2021. Chemical risk governance: Exploring stakeholder participation in Canada, the USA, and the EU. Ambio.  ​Details

Desforges, J.P., Legrand, E., Boulager, E., Liu, P., Xia, J., Butler, H., Chandramouli, B., Ewald, J., Basu, N., Hecker, M., Head, J., Crump, D.. 2021. Using Transcriptomics and Metabolomics to Understand Species Differences in Sensitivity to Chlorpyrifos in Japanese Quail and Double-Crested Cormorant Embryos. Environ Toxicol Chem 2021;00:1–15. ​Details

Mondou, M., Maguire, S., Pain, G., Crump, D., Hecker, M., Basu, N., Hickey, G.. 2021. Envisioning an international validation process for New Approach Methodologies in chemical hazard and risk assessment. Environmental Advances, Vol 4, July.  2021.  Details

Alcaraz, A.J.G, Mikulášek, K., Potěšil, D., Park, B., Shekh, K., Ewald, J., Burbridge, C., Zdráhal, Z., Schneider, D., Xia, J., Crump, D., Basu, N., and Hecker, M.. 2020. Assessing the Toxicity of 17α-Ethinylestradiol in Rainbow Trout Using a 4-Day Transcriptomics Benchmark Dose (BMD) Embryo Assay Environ. Sci. Technol. 2021, 55, 15, 10608–10618. Details

Alcaraz, A.J.G, Potěšil, D., Mikulášek, K., Green, D., Park, B., Burbridge, C., Bluhm, K., Soufan, O., Lane, T., Pipal, M., Brinkmann, M., Xia, J., Zdráhal, Z., Schneider, D., Crump, D., Basu, N., Hogan, N., and Hecker, M.. 2020. Development of a Comprehensive Toxicity Pathway Model for 17α-Ethinylestradiol in Early Life Stage Fathead Minnows (Pimephales promelas). Environmental Science & Technology. 55 (8), 5024-5036. Details

Crump, D., Boulanger, E., Farhat, A., Williams, K.L., Basu, N., Hecker, M., Head, J.A. 2020. Effects on Apical Outcomes of Regulatory Relevance of Early-Life Stage Exposure of Double-Crested Cormorant Embryos to 4 Environmental Chemicals​. ​​​Environmental Toxicology. Details​

Pain, G., Hickey, G. Mondou, M., Crump, D., Hecker, M., Basu, N., Maguire, S. 2020. Drivers of and Obstacles to the Adoption of Toxicogenomics for Chemical Risk Assessment: Insights from Social Science Perspectives. Environmental Health Perspectives, https://doi.org/10.1289/EHP6500. Details

Ewald, J.D., Soufan, O., Xia, J., Basu, N. 2020. FastBMD: an online tool for rapid benchmark dose-response analysis of transcriptomics data. ​​​Bioinformatics, btaa700, https://doi.org/10.1093/bioinformatics/btaa700. Details

Ewald, J.D., Soufan, O., Crump, D., Hecker, M., Xia, J., Basu, N. 2020. ​EcoToxModules: Custom Gene Sets to Organize and Analyse Toxicogenomics Data from Ecological Species. Environmental Sciences & Technology
https://doi.org/10.1021/acs.est.9b06607.  Details

​Mondou, M., Hickey G., Rahman, T., Maguire, S., Pain, G., Crump, D., Hecker, M., Basu, N. 2020. ​Factors affecting the perception of New Approach Methodologies (NAMs) in the ecotoxicology community. Integr Environ Assess Manag. https://doi.org/10.1002/ieam.4244.  Details

Soufan, O., Ewald. J., Viau, C., Crump, D., Hecker, M., Basu, N., Xia​, J. 2019. T1000: A reduced gene set prioritized for toxicogenomic studies. PeerJ 7:e7975 https://doi.org/10.7717/peerj.7975.  Details

Farhat, A., Crump, D., Bidinosti, L., Boulanger, E., Basu, N., Hecker, M., Head, J.A. 2019. An Early‐life Stage Alternative Testing Strategy for Assessing the Impacts of Environmental Chemicals in Birds. Environ Toxicol Chem. doi: 10.1002/etc.4582. Details

Basu N, Crump D, Head J, Hickey G, Hogan N, Maguire S, Xia J, Hecker M. 2019. EcoToxChip: A next-generation toxicogenomics tool for chemical prioritization and environmental management. Environ Toxicol Chem. 38(2):279-288. Details

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